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You submited 7832 sequence/s. We found 286 IRE/s in 255 different sequence/s:

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Sequence Start End Loop Type Mismatches 3' Bulge N25 GU/UG Pred. Loop Pred. Pairs Pred. C8 Free Energy Quality Select
ENST00000017003 3465 4 N07-N25:C_C - C 0 -10.10 Low
ENST00000019019 376408 1 - N20b:C G 1 -6.70 Low
ENST00000013125 96127 5 N11-N22:C_A - C 0 -3.60 Medium
ENST00000064571 11111143 16 - N22b:T C 1 -3.60 Medium
ENST00000064571 145176 16 N09-N24:G_A - G 2 -3.10 Low
ENST00000160596 473504 14 N09-N24:C_C - T 0 -6.60 Medium
ENST00000064780 6697 14 N10-N23:C_C - C 1 -7.10 Medium
ENST00000158526 315346 15 N07-N25:C_A - A 1 -10.00 Low
ENST00000204549 127 14 N09-N24:A_G - A 0 -4.20 Medium
ENST00000185206 1041 12 N10-N23:T_C - A 2 0.00 Low
ENST00000181839 171202 8 N10-N23:A_A - G 1 -3.60 Low
ENST00000194530 331362 3 N10-N23:C_C - A 1 0.00 Low
ENST00000211238 1748 15 N12-N21:G_G - G 2 -3.70 Low
ENST00000205402 176207 3 N13-N20:C_A - C 2 -1.10 Low
ENST00000211402 1547 16 - N23b:T C 1 -4.60 Low
ENST00000202028 127158 16 N10-N23:C_T - T 2 -4.00 Low
ENST00000215886 129160 14 N07-N25:C_A - A 1 -11.00 High
ENST00000215886 129161 14 - N23b:G G 0 -11.00 High
ENST00000222553 255286 8 N11-N22:C_T - C 0 -6.90 Low
ENST00000220751 251283 14 - N22b:C C 1 -1.80 Low
ENST00000221930 783814 8 - - C 1 -7.80 Low
ENST00000216127 493524 1 N12-N21:C_C - G 0 -6.90 Medium
ENST00000223145 233 17 N13-N20:G_G - G 1 -0.90 Medium
ENST00000222125 19852016 16 N13-N20:T_T - G 2 -3.90 Low
ENST00000222125 17061738 18 - N21b:T T 2 -5.50 Low
ENST00000223214 129 16 N11-N22:A_G - C 0 -13.70 Low
ENST00000219299 2253 8 N10-N23:T_C - T 2 -3.70 Low
ENST00000218789 83114 3 N09-N24:G_A - G 2 -11.90 Medium
ENST00000218789 461492 8 N13-N20:C_C - T 2 0.00 Low
ENST00000223357 132 16 N09-N24:C_C - A 0 -7.70 Low
ENST00000219343 4274 15 - N22b:T G 2 -4.92 Medium
ENST00000222792 178209 8 N13-N20:A_A - G 1 -5.20 Medium
ENST00000219473 3971 17 - N23b:G G 2 -7.60 Medium
ENST00000229416 210241 16 N10-N23:G_A - C 0 -12.40 Low
ENST00000228865 230261 16 N13-N20:A_G - G 2 -4.80 Low
ENST00000225927 739 1 - N22b:A C 2 0.00 Medium
ENST00000237853 75106 4 N12-N21:C_A - G 1 -0.80 Low
ENST00000232978 101132 1 N11-N22:T_T - C 2 0.00 Low
ENST00000239457 500531 2 N12-N21:T_C - G 2 0.00 Low
ENST00000239882 126 14 N11-N22:C_T - A 1 0.00 Medium
ENST00000246314 5687 15 N11-N22:A_C - T 2 -4.90 Low
ENST00000245185 259290 14 N11-N22:C_A - G 2 0.00 Low
ENST00000233668 110141 16 N09-N24:G_A - T 1 -4.20 Low
ENST00000245382 77108 5 N13-N20:T_C - A 1 -5.40 Medium
ENST00000234453 304335 16 N09-N24:G_G - C 1 -8.70 Low
ENST00000234453 304336 16 - N23b:G C 1 -16.10 Low
ENST00000246229 209240 16 N12-N21:T_T - T 2 0.00 Low
ENST00000248564 277308 16 N07-N25:G_A - A 2 -6.20 Low
ENST00000225655 482513 14 N11-N22:G_G - C 0 -3.20 Low
ENST00000228567 3869 16 N09-N24:G_G - C 2 -2.90 Low
ENST00000250144 132163 4 N07-N25:T_C - C 2 -4.40 Medium
ENST00000238607 259290 3 N13-N20:C_C - G 2 -1.80 Low
ENST00000242728 71103 17 - N23b:G G 2 -5.50 Low
ENST00000240328 100131 14 N13-N20:A_G - C 0 -4.60 Medium
ENST00000243786 152180 8 N12-N21:A_A - G 1 0.00 Low
ENST00000245414 101132 4 N07-N25:A_G - G 0 -9.80 Medium
ENST00000234371 101132 8 N10-N23:G_A - C 1 -6.90 Medium
ENST00000234371 101133 8 - N22b:A C 1 -3.40 Medium
ENST00000238831 219246 16 N13-N20:T_C - C 1 -4.00 Low
ENST00000238508 2152 1 N10-N23:G_A - A 0 -3.74 High
ENST00000244040 189220 8 N13-N20:C_A - C 2 -8.30 Low
ENST00000242737 1142 16 - - G 1 -6.90 Medium
ENST00000246039 300331 2 N07-N25:C_C - C 1 -4.80 Medium
ENST00000250055 86118 16 - N20b:G G 2 -3.60 Low
ENST00000246012 197228 8 - - T 1 -7.50 Medium
ENST00000245138 33843416 19 - N20b:C T 2 -0.20 Low
ENST00000229268 1243 14 N09-N24:G_G - T 2 -1.00 Low
ENST00000230256 111142 16 N11-N22:T_C - A 0 0.00 Low
ENST00000227503 224255 15 N10-N23:G_G - C 0 -5.40 Low
ENST00000233893 286317 16 N11-N22:C_C - G 1 -11.20 Low
ENST00000240731 134165 2 N12-N21:G_G - G 1 -5.60 Low
ENST00000233809 4778 8 N11-N22:T_T - C 0 -2.90 Low
ENST00000225603 115147 1 - N22b:A C 2 -2.10 Medium
ENST00000238459 420451 14 N07-N25:C_C - C 2 -4.40 Low
ENST00000228936 72103 2 N13-N20:T_T - T 1 0.00 High
ENST00000238379 236267 15 N11-N22:A_C - T 1 0.00 Low
ENST00000243314 88119 1 N13-N20:A_C - G 1 -3.70 Medium
ENST00000230658 76107 19 N13-N20:C_C - G 0 -6.90 Low
ENST00000245796 3162 16 N12-N21:T_C - C 1 -0.80 Low
ENST00000246104 235267 8 - N22b:G T 2 -7.10 Low
ENST00000246117 80111 14 N09-N24:C_C - G 1 -12.70 Medium
ENST00000263360 230261 16 - - C 0 -9.30 Medium
ENST00000254346 3970 16 N13-N20:C_T - T 1 -3.10 Medium
ENST00000257860 12081240 16 - N21b:G C 2 -2.55 Low
ENST00000257860 825856 8 N09-N24:G_G - G 2 -0.50 Low
ENST00000261965 130161 1 N12-N21:G_G - C 1 -6.30 Medium
ENST00000260061 2253 4 N10-N23:C_C - G 1 -4.50 Low
ENST00000260061 2254 4 - N22b:C G 1 -3.40 Low
ENST00000263182 147178 3 N07-N25:A_G - G 1 -4.50 Medium
ENST00000262227 197228 1 N10-N23:A_G - A 0 -0.90 Medium
ENST00000260385 671702 2 N09-N24:C_T - C 0 -12.20 High
ENST00000262244 86117 2 N11-N22:C_C - G 2 -2.70 Low
ENST00000262820 809840 3 N09-N24:C_A - C 0 -2.60 Medium
ENST00000261739 163194 8 N09-N24:G_A - G 0 -12.00 Medium
ENST00000251473 129160 17 - - G 2 -11.20 Medium
ENST00000261867 138169 14 N12-N21:C_C - G 2 -4.30 Low
ENST00000262866 5384 2 N10-N23:G_A - G 1 -3.60 Medium
ENST00000256509 250282 2 - N22b:A G 0 -11.80 High
ENST00000261678 60626093 7 N12-N21:A_C - G 2 0.00 Low
ENST00000253405 77108 5 N13-N20:T_C - A 1 -5.40 Medium
ENST00000253401 741772 8 N11-N22:A_A - A 1 0.00 Low
ENST00000252577 204235 13 N09-N24:T_C - G 0 -7.20 Low
ENST00000261024 118149 8 N12-N21:C_T - C 2 -0.70 Low
ENST00000261024 198229 1 - - A 0 -7.20 High
ENST00000251676 87119 7 - N20b:G C 2 -1.70 Low
ENST00000259075 130 19 N07-N25:T_T - T 0 -5.70 High
ENST00000251776 189220 16 N07-N25:C_T - T 2 -8.60 Medium
ENST00000262843 304335 4 N11-N22:C_T - C 1 -3.30 Low
ENST00000261654 235266 1 - - T 1 -7.90 Medium
ENST00000261654 125156 2 N11-N22:C_A - G 2 0.00 Low
ENST00000255202 77108 17 - - G 2 -0.20 Medium
ENST00000255202 77109 17 - N23b:A A 2 0.00 Low
ENST00000253688 275306 8 N11-N22:A_A - G 1 -2.40 Low
ENST00000263174 183214 3 N10-N23:T_T - C 0 -4.70 Medium
ENST00000261483 828859 5 N12-N21:A_C - G 1 -2.40 Low
ENST00000252336 138169 2 N09-N24:G_G - G 1 -5.60 Medium
ENST00000254320 95126 8 N09-N24:C_A - A 1 -9.50 Low
ENST00000263734 77109 1 - N21b:T A 0 -5.00 High
ENST00000263734 189220 8 N13-N20:C_A - G 1 0.00 Low
ENST00000256429 204229 16 N13-N20:G_G - G 2 -2.80 Low
ENST00000261854 2051 12 N07-N25:G_G - G 1 -9.00 Low
ENST00000261854 2052 12 - N23b:G T 2 -7.80 Medium
ENST00000263220 505537 15 - N20b:A G 2 -2.30 Low
ENST00000251275 2455 19 N11-N22:A_G - T 2 -1.10 Low
ENST00000262033 85116 14 N09-N24:C_T - T 1 -3.00 Medium
ENST00000261738 163194 8 N09-N24:G_A - G 0 -12.00 Medium
ENST00000250699 4772 1 - - C 2 -1.70 Medium
ENST00000258796 5182 14 N09-N24:G_G - G 0 -10.90 Medium
ENST00000263434 1541 1 N09-N24:C_A - G 2 -3.30 Medium
ENST00000263434 1541 1 - N23b:A G 2 -3.30 Medium
ENST00000260595 2354 8 N12-N21:G_G - C 0 -4.10 Low
ENST00000262462 5485 8 N11-N22:G_A - T 1 -7.40 Low
ENST00000262462 603634 2 N13-N20:A_A - T 1 -5.70 High
ENST00000261455 6193 1 - N21b:C C 2 -7.00 Medium
ENST00000256594 76107 14 N11-N22:G_G - G 1 -4.50 Low
ENST00000261461 101132 15 N10-N23:C_C - C 1 -3.80 Medium
ENST00000263073 2655 12 N07-N25:A_G - G 0 -11.70 Medium
ENST00000261653 2960 8 - - G 2 -9.60 Low
ENST00000262053 206237 16 N10-N23:A_G - G 2 -3.10 Low
ENST00000262418 73104 8 N12-N21:A_C - G 2 -2.80 Low
ENST00000258495 31283160 3 - N21b:G A 2 0.00 Low
ENST00000259989 6293 2 N10-N23:G_A - G 2 0.00 Low
ENST00000262419 427458 15 N09-N24:A_A - C 2 -1.60 Low
ENST00000251195 1344 14 N07-N25:A_C - C 2 -13.40 Low
ENST00000251195 1345 14 - N23b:T T 1 -8.80 Low
ENST00000262089 520551 8 N10-N23:C_T - G 2 0.00 Low
ENST00000262089 520552 8 - N22b:T G 2 -5.80 Low
ENST00000293829 181212 16 N09-N24:T_C - G 0 -10.90 Low
ENST00000265295 142174 14 - N23b:C G 2 -4.10 Low
ENST00000285273 906937 16 N09-N24:C_C - C 2 0.00 Low
ENST00000296543 271302 14 N10-N23:G_G - T 1 -5.50 Medium
ENST00000295065 839 8 N13-N20:C_T - G 2 -2.30 Low
ENST00000295324 233 15 N12-N21:C_A - G 2 -2.40 Low
ENST00000295324 693724 8 N09-N24:A_G - T 2 -8.80 Low
ENST00000299320 347378 17 N10-N23:A_G - T 1 -5.10 Low
ENST00000265272 5182 5 N09-N24:A_G - G 1 -5.20 Low
ENST00000264723 12251257 8 - N22b:T T 2 -1.10 Medium
ENST00000289248 9741005 16 N13-N20:G_A - G 2 -1.10 Low
ENST00000287908 275306 16 N10-N23:C_C - C 2 -4.00 Low
ENST00000265717 84115 14 N12-N21:G_G - C 0 -9.20 Medium
ENST00000288490 121152 16 N09-N24:G_G - G 0 -7.40 Medium
ENST00000265896 132163 14 N10-N23:T_C - G 0 -4.70 Low
ENST00000281578 611642 4 N11-N22:T_C - G 0 -4.20 Medium
ENST00000291592 106137 5 N07-N25:G_G - G 1 -10.70 Medium
ENST00000298198 85116 16 N13-N20:G_A - G 2 -8.90 Low
ENST00000278175 114145 6 N07-N25:T_C - C 1 -8.20 Low
ENST00000268607 562593 14 N07-N25:C_A - A 0 -9.70 High
ENST00000294543 129 14 N10-N23:G_G - C 0 -3.40 Low
ENST00000292779 3667 1 - - C 2 -4.60 Medium
ENST00000300053 378410 16 - N21b:A T 1 -2.70 Medium
ENST00000287218 368399 2 N09-N24:C_C - C 2 -6.00 Low
ENST00000297801 25422573 8 N13-N20:T_C - G 2 -4.00 Low
ENST00000266068 105136 19 N10-N23:A_G - A 2 0.00 Low
ENST00000279451 339370 8 N10-N23:C_T - C 0 -12.10 Low
ENST00000285243 2455 16 N13-N20:C_A - T 1 -11.80 Medium
ENST00000285046 72103 5 N09-N24:C_T - C 1 -1.60 Low
ENST00000281455 94125 18 - - G 1 -9.50 Medium
ENST00000287656 729760 11 N11-N22:G_A - C 1 0.00 Low
ENST00000296477 295326 16 N11-N22:G_A - G 1 -1.80 Medium
ENST00000296437 160191 13 N10-N23:T_T - A 2 0.00 Low
ENST00000296043 693724 18 N11-N22:C_A - C 1 0.00 Low
ENST00000299576 4776 17 N12-N21:A_C - G 2 -0.10 Low
ENST00000291715 247279 8 - N20b:G G 2 0.00 Low
ENST00000299824 152183 8 - - G 1 -12.60 Low
ENST00000299824 152184 8 - N23b:G G 1 -5.20 Low
ENST00000288071 1850 2 - N21b:G C 1 -4.70 Medium
ENST00000265340 1951 8 - N20b:T G 2 -0.60 Low
ENST00000297598 125156 4 N12-N21:T_C - A 0 -3.70 Medium
ENST00000293215 13121343 18 N07-N25:G_G - G 0 -11.30 Medium
ENST00000293215 13121344 18 - N22b:A T 2 -4.50 Medium
ENST00000293874 1648 13 - N23b:C C 2 -6.80 Low
ENST00000270645 94125 4 N11-N22:T_C - T 2 0.00 Low
ENST00000300151 171202 16 N11-N22:T_C - G 2 -5.00 Low
ENST00000287169 152184 16 - N21b:G C 1 -6.30 Low
ENST00000297459 739 16 - N20b:C G 1 -7.30 Medium
ENST00000274392 446477 19 N07-N25:C_T - T 2 -4.00 Medium
ENST00000295208 78109 2 N09-N24:C_T - G 2 0.00 Low
ENST00000300811 256287 2 N10-N23:G_A - C 0 -9.80 Medium
ENST00000296289 651683 2 - N20b:A G 1 -5.80 Medium
ENST00000283506 92123 1 N07-N25:G_G - G 1 -9.50 Medium
ENST00000278980 323354 16 N07-N25:A_C - C 1 -6.90 High
ENST00000273654 345376 8 N07-N25:C_A - A 2 0.00 Low
ENST00000264805 262293 8 N09-N24:C_C - G 1 -10.20 Low
ENST00000271715 146177 16 N09-N24:C_C - T 1 -2.50 Low
ENST00000264907 693724 18 N11-N22:C_A - C 1 0.00 Low
ENST00000266661 142173 16 - - A 0 -6.90 Medium
ENST00000293995 1950 8 N12-N21:G_G - T 1 -0.70 Low
ENST00000299980 3364 8 N07-N25:T_T - T 0 -7.90 High
ENST00000267845 149180 19 N09-N24:A_C - G 2 0.00 Low
ENST00000281187 100131 3 N07-N25:C_C - C 2 -4.40 Medium
ENST00000264601 362393 16 N07-N25:A_A - A 0 -4.20 Low
ENST00000294347 226257 5 N09-N24:C_C - C 0 -10.40 Low
ENST00000264993 282313 14 N10-N23:G_G - C 0 -4.90 Medium
ENST00000298974 88119 1 N13-N20:A_C - G 1 -3.70 Medium
ENST00000264122 77108 13 N11-N22:C_C - G 1 -4.50 Low
ENST00000264735 87118 2 N13-N20:T_C - G 2 -2.50 Low
ENST00000282633 1745 14 N11-N22:A_C - C 0 -5.50 Low
ENST00000274631 206238 14 - N23b:C G 2 -4.10 Low
ENST00000265317 11661198 4 - N21b:A G 2 -4.70 Low
ENST00000265317 343374 4 N10-N23:G_A - C 1 -8.00 Low
ENST00000290470 439470 2 N07-N25:G_A - A 2 -2.70 Low
ENST00000264775 286317 16 N07-N25:T_T - T 1 -7.80 Low
ENST00000269185 432463 16 N12-N21:G_G - G 1 -6.10 Medium
ENST00000290818 4980 1 N13-N20:T_C - G 2 0.00 Low
ENST00000283195 93124 16 N13-N20:C_C - T 2 -2.30 Low
ENST00000270792 97128 16 N07-N25:T_C - C 2 -3.90 Medium
ENST00000265094 168199 16 N13-N20:T_T - T 2 -7.00 Low
ENST00000276414 15951626 8 N10-N23:T_T - A 2 0.00 Low
ENST00000278187 4273 6 N10-N23:A_G - G 0 0.00 Low
ENST00000278187 2051 3 N13-N20:C_T - T 0 -2.50 Low
ENST00000280780 306337 16 N09-N24:C_T - C 2 -1.80 Medium
ENST00000299550 3162 1 N13-N20:T_C - G 2 -3.20 Low
ENST00000273550 5889 1 - - C 1 -4.40 High
ENST00000273550 3364 13 N09-N24:G_G - G 1 -4.40 Low
ENST00000289656 168200 4 - N21b:A G 2 -4.70 Low
ENST00000284202 108139 8 N13-N20:G_A - C 2 -2.50 Low
ENST00000280379 296328 16 - N20b:G T 1 -4.00 Low
ENST00000296446 156187 17 N09-N24:G_G - G 1 -5.40 Low
ENST00000292401 6394 8 - - G 0 -7.70 Medium
ENST00000292090 435 15 N12-N21:G_G - G 0 -8.70 Medium
ENST00000265136 3971 16 - N22b:A G 1 -3.00 Medium
ENST00000299218 249280 8 N12-N21:G_G - C 1 -2.50 Low
ENST00000291775 4778 8 N13-N20:C_C - A 2 0.00 Low
ENST00000291900 302333 1 N07-N25:T_C - C 1 -5.60 Medium
ENST00000264703 77109 8 - N22b:G G 1 -5.00 Low
ENST00000265112 148179 19 N12-N21:G_G - G 0 -6.40 Medium
ENST00000288986 74105 1 N11-N22:C_T - T 1 -3.80 Medium
ENST00000296794 108139 2 N10-N23:G_G - C 1 -1.70 Medium
ENST00000296794 108140 2 - N22b:G T 2 -4.10 Medium
ENST00000263881 281313 16 - N20b:A G 1 -13.00 Low
ENST00000299871 134165 2 N12-N21:G_G - G 1 -5.60 Low
ENST00000288014 5385 14 - N20b:G G 1 -7.90 Low
ENST00000276461 75106 8 N10-N23:C_C - T 1 -1.00 Low
ENST00000268097 226257 8 N07-N25:A_G - G 1 -9.50 Low
ENST00000268097 385416 2 - - C 0 -10.50 High
ENST00000268182 90121 2 N11-N22:C_C - G 2 -0.20 Low
ENST00000274547 152183 19 N12-N21:C_A - C 1 -1.90 Medium
ENST00000273450 70101 15 N09-N24:T_T - A 1 -3.40 Low
ENST00000273450 70102 15 - N23b:T G 2 -2.70 Low
ENST00000296449 335366 1 N13-N20:A_A - A 1 -1.00 Medium
ENST00000298530 273304 16 N11-N22:T_T - G 2 -3.23 Low
ENST00000274093 104136 15 - N21b:T C 1 -5.20 Medium
ENST00000264266 176207 13 N11-N22:C_T - C 1 -1.70 Low
ENST00000299957 196228 4 - N21b:G G 1 -9.30 Low
ENST00000290974 839 18 N10-N23:G_G - G 2 -2.20 Low
ENST00000295706 564595 15 N12-N21:G_A - G 2 0.00 Low
ENST00000283558 2556 14 N07-N25:G_G - G 0 -10.70 Medium
ENST00000282470 247278 3 N09-N24:C_A - G 2 -2.70 Low
ENST00000282470 247279 3 - N23b:A G 2 -2.70 Low
ENST00000274766 528559 16 N10-N23:G_A - T 2 -5.90 Low
ENST00000274766 528560 16 - N22b:A C 2 -3.30 Low
ENST00000270059 6394 19 N11-N22:A_G - T 2 -1.10 Low
ENST00000265563 174205 17 N09-N24:G_G - G 1 -5.40 Low
ENST00000264106 106137 12 N12-N21:G_A - C 1 -5.10 Low
ENST00000300935 168199 15 N07-N25:G_G - G 1 -12.60 Medium
ENST00000300935 168200 15 - N23b:G C 1 -8.90 Medium
ENST00000290722 2453 2 N13-N20:T_C - G 2 -3.80 Medium
ENST00000296092 4071 2 N07-N25:C_A - A 2 -2.40 Medium
ENST00000269305 3061 19 N12-N21:A_G - T 1 -1.10 Medium
ENST00000288304 222253 16 N09-N24:C_T - C 0 -3.50 Medium
ENST00000288304 300331 14 - - C 2 -6.00 Medium
ENST00000288304 300332 14 - N20b:T C 1 -7.60 Medium
ENST00000273113 315346 1 N11-N22:C_T - A 2 0.00 Low
ENST00000275732 673704 14 N09-N24:C_C - T 2 -6.10 Low
ENST00000292095 204235 4 N11-N22:C_A - T 2 -1.80 Low
ENST00000276974 189220 16 N10-N23:T_T - C 2 -11.60 Low