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Nucleic Acids Research
Web Servers Issue 2010 Ire Ipr1

Structure of iron regulatory protein 1 complexed with ferritin IRE-RNA.(PDB: 2IPY)

Welcome to the SIREs server

The SIREs (searching for IREs) web server will predict iron-responsive elements in RNA or DNA sequences based on a sequence searcher Perl program.

To get more information about iron-responsive elements prediction algorithm and the iron regulatory proteins/iron-responsive elements regulatory system, please go to the Documentation section

Example:

>Mouse Ferritin H (NM_010239) 1-240
CAGACGTTCTCGCCCAGAGTCGCCGCGGTTTCCTGCTTCAACAGTGCTTGAACGGAACCC
GGTGCTCGACCCCTCCGACCCCCGCCGGCCGCTTCGAGCCTGAGCCCTTTGCAACTTCGT
CGTTCCGCCGCTCCAGCGTCGCCACCGCGCCTCGCCCCGCCGCCACCATGACCACCGCGT
CTCCCTCGCAAGTGCGCCAGAACTACCACCAGGACGCGGAGGCTGCCATCAACCGCCAGA

View a multiple sequence example output